Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901556.1_cds_XP_016451602.1_45929
CDS Infomation

[gene=LOC107776244] [db_xref=GeneID:107776244] [protein=phospholipase A1-Ibeta2, chloroplastic-like] [protein_id=XP_016451602.1] [location=47098..48702] [gbkey=CDS]
Sequence

ATGCAGATCGGAGCAGCACTTCCGGCGACCAATTTTAATCTTTTTCAGGCAACGGTAAAA
TGCAATGGATGTTCATTAAACCCTTCTGCAATGGCTACTTCTGTAAATGCACAAAGCTTA
AAAACACTCTCGTCATCAACCACAGAGATGACTAAAAAACACATTTCCAATCTTGAAAAG
CTTCTTCAGAAGCAATCTCAGAAAAAACTATCAGCAGCTGATGCAAAGCCTGTGGTTCAA
GAATCCAGTAATAATGGGTTATTAGAAAACAGGGGAAGAAATTTGTTGGAAGGGCTTAAT
TTGGCTAGTATTTGGCCTGAGATGAAAGCTGCTGAGGAAATGTCGCCAAGGCGTTTGAAC
AGATTAAAAAGACTGTTATCTTCCAAATCAATGGAATATTCTCCTAGGAACAATATTTGT
AGCCGGTGGAAGGAATACCACGGCAGCAATAACTGGCTGGGTCTACTTGATCCGTTAGAT
GAGAATCTACGGCGAGAATTGGTTCGATATGGGGAGTTCATTCAGGCAGCTTATCATTGT
TTCCATTCCAACCCTGCCATGTCAGCAGAGGAGGGGCCATTGTCCGCGAGACACGTGGCG
TTGCCCGATAGGTCTTATAAGGTGACCAAGAACCTTTATGCAACTTCGTCCATTGGGTTG
CCAACGTGGGTGGATGACGTGGCACCTGATCTTGGATGGATGACCCAAAGGTCTAGTTGG
ATTGGATATGTGGCAGTGTGCGATGACAGGAAAGAAATTCAACGAATGGGAAGGAGGGAT
ATTGTTATTGCGTTACGAGGTACTGCCACGTGTTTAGAGTGGGCAGAGAATTTTCGTGCC
TTGCTAGTAGAACAAAATGATGATTCTGCTGAAGAACAATCTAAAGTGGAATGTGGATTC
TTGAGTTTGTACAAAACAGGTGGAGAACATGTCCCAAGTTTAGCTGAATCAGTTGTTAAC
GAAGTACAAAGATTAATTGAACAGTATAAAGGCGAGCCTCTAAGCATCACGGTCACAGGG
CATAGTCTCGGTGCAGCTTTAGCTCTTTTAGTAGCAGATGATGCAAGTACATGTGCACCA
AATGCGCCACCAGTGGCCGTTTTTTCCTTCGGTGGCCCTCGAGTAGGCAATCGGGTTTTT
GCGGATCGTCTTAACGCGAATAATGTTAAGGTATTACGTATTGTGAATAATCAAGACGTA
ATCACCAGGGTTCCAGGTATGTTTGTGAGCGAAGCGCTAGACAAAAAGCTTAGAGAATCA
GGAGCAGGTCGCGTGCTAGAGATGTTAGATTGTAGGATGCCATGGGCGTATTCTCACGTT
GGTACTGAATTCAGAGTTGACACGAGAATGTCGCCATTTTTGAAGCCTGACGCAGATGTT
GCATGTTGCCATGACTTGGAGGCATATTTACATTTGGTGGATGGATTTTTAGCATCTGAT
TGTCCATTTAGGCCTAATGCTAAGAGAAGTCTTGTGAGATTGTTAAAAGACCAACGGTCT
AACTTCAAAAGACTTTACACTAGTAAGGCAAAGGACTTGAGCATCAGTCTTGATAGAGAA
CATAATTTTGCTAGGAGTAGTTGCTTGCCTAGTCCATCATCTTGA

Peptide Sequence

PEP ID

XP_016451602.1
PEP Infomation

PREDICTED: phospholipase A1-Ibeta2, chloroplastic-like [Nicotiana tabacum]
Sequence

MQIGAALPATNFNLFQATVKCNGCSLNPSAMATSVNAQSLKTLSSSTTEMTKKHISNLEK
LLQKQSQKKLSAADAKPVVQESSNNGLLENRGRNLLEGLNLASIWPEMKAAEEMSPRRLN
RLKRLLSSKSMEYSPRNNICSRWKEYHGSNNWLGLLDPLDENLRRELVRYGEFIQAAYHC
FHSNPAMSAEEGPLSARHVALPDRSYKVTKNLYATSSIGLPTWVDDVAPDLGWMTQRSSW
IGYVAVCDDRKEIQRMGRRDIVIALRGTATCLEWAENFRALLVEQNDDSAEEQSKVECGF
LSLYKTGGEHVPSLAESVVNEVQRLIEQYKGEPLSITVTGHSLGAALALLVADDASTCAP
NAPPVAVFSFGGPRVGNRVFADRLNANNVKVLRIVNNQDVITRVPGMFVSEALDKKLRES
GAGRVLEMLDCRMPWAYSHVGTEFRVDTRMSPFLKPDADVACCHDLEAYLHLVDGFLASD
CPFRPNAKRSLVRLLKDQRSNFKRLYTSKAKDLSISLDREHNFARSSCLPSPSS

Transcript Sequence

Gene sequence data has not been registered.